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Vandepol NS, Shade A. 0. Is everything everywhere? A hands-on activity to engage undergraduates with key concepts in quantitative microbial biogeography.
J Microbiol Biol Educ. 0:e00170-23.
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Vandepol N., Liber J, Yocca A, Matlock J, Edger P, Bonito G (2022)
Linnemannia elongata (Mortierellaceae) stimulates
Arabidopsis thaliana aerial growth and responses to auxin, ethylene, and reactive oxygen species.
PLoS ONE 17(4): e0261908
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https://doi.org/10.1371/journal.pone.026190In collection
Vandepol, N. (2020). Mortierellaceae Phylogenomics and Tripartite Plant-Fungal-Bacterial Symbiosis of Mortierella elongata. Michigan State University - Dissertation.
https://www.proquest.com/openview/e0664b2c12c1abfe8e4b70cdf3e09a45/1?pq-origsite=gscholar&cbl=44156Article
Vandepol, N., Liber, J., Desirò, A., Na, H., Kennedy, M., Barry, K., ... & Bonito, G. (2020). Resolving the Mortierellaceae phylogeny through synthesis of multi-gene phylogenetics and phylogenomics.
Fungal diversity, 104(1), 267-289.
https://link.springer.com/article/10.1007/s13225-020-00455-5Article
Du, Z. Y., Zienkiewicz, K.,
Vandepol, N., Ostrom, N. E., Benning, C., & Bonito, G. M. (2019). Algal-fungal symbiosis leads to photosynthetic mycelium.
Elife, 8, e47815.
https://elifesciences.org/articles/47815In proceedings
Hejase, H. A.,
Vandepol, N., Bonito, G. M., & Liu, K. J. (2018, October). Fastnet: fast and accurate statistical inference of phylogenetic networks using large-scale genomic sequence data. In
RECOMB International conference on Comparative Genomics (pp. 242-259). Springer, Cham.
https://link.springer.com/chapter/10.1007/978-3-030-00834-5_14In proceedings
Hejase, H. A.,
Vandepol, N., Bonito, G. M., Edger, P. P., & Liu, K. J. (2017, August). Coal-Miner: a statistical method for GWA studies of quantitative traits with complex evolutionary origins. In
Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics (pp. 107-114).
https://dl.acm.org/doi/abs/10.1145/3107411.3107490Article
Gdanetz, K., Benucci, G. M. N.,
Vandepol, N., & Bonito, G. (2017). CONSTAX: a tool for improved taxonomic resolution of environmental fungal ITS sequences.
BMC bioinformatics, 18(1), 1-9.
https://link.springer.com/article/10.1186/s12859-017-1952-xArticle
Desirò, A., Rimington, W. R., Jacob, A.,
Vandepol, N., Smith, M. E., Trappe, J. M., ... & Bonito, G. (2017). Multigene phylogeny of Endogonales, an early diverging lineage of fungi associated with plants.
IMA fungus, 8(2), 245-257.
https://link.springer.com/article/10.5598/imafungus.2017.08.02.03Article
Uehling, J., Gryganskyi, A., Hameed, K., Tschaplinski, T., Misztal, P. K., Wu, S., Desirò, A.,
Vandepol, N., ... & Bonito, G. (2017). Comparative genomics of
Mortierella elongata and its bacterial endosymbiont
Mycoavidus cysteinexigens.
Environmental microbiology, 19(8), 2964-2983.
https://sfamjournals.onlinelibrary.wiley.com/doi/abs/10.1111/1462-2920.13669